Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892274.1_cds_XP_016447168.1_41953
CDS Infomation

[gene=LOC107772181] [db_xref=GeneID:107772181] [protein=uncharacterized protein LOC107772181] [protein_id=XP_016447168.1] [location=complement(join(62922..63341,63511..63927,64018..64077,64230..64757,65796..66470))] [gbkey=CDS]
Sequence

ATGGCATGCAGTTGTGTATCCATAATAAGCTCTCCTGTGACCAAAAGCTCTAAAGATGCG
TGGAAGGACCAAGACAACTTCCGGAGTTCATTTTCGAGCAAAGGGAATCGCGAAAAGGCT
CAAATGAGAAGATCCTATTCCGACAACCACCTGTGCTGTCGTGCAAATCGTATCCAGTGT
TCAGCAACACAGCCAAAACTGAAGAGTAGTCATTCCACAGGAGGTCCCTTTAAACTTCAG
TTGTCAAGTTCTTTCCTCCCTGATTCTCTTCGGTCGTTCTTGTTTGATATTGACACCAAT
AAGGATATTAACATAGAGGACGTTATCTTTGAGACTGATCCTGACCATGATCATGACAAC
AACGGGATGGAGGTTGAGGACGAGACAAGAAGGTCCAATTGGATTCGAAGGCTCGTGGAA
CTTAGGAGAAATTGGATAGAGAAACAGAAGAAGAATGACACTGCAGAGATGCTCGACATG
GAAAATAGTGGTGGAGATTGCGAGGATGAAGGTTGTGAAGTAGACTATGAAGATGACAAT
GATGCAGCTGGGGAGATAAACATTGATAGAGAATCCTTCTCCAGGTTGTTAAGGCGAATC
TCCTGGTCAGATTCCAAGCTTTTCTCTCAGCTGGCTTTCTTATGCAACATGGCTTATGTT
ATTCCCGAGATTAAGCCCGAGGATTTAGAAAGATGCTATGGTCTGGTCTTCGTAACCTCT
TCCTTGGTGAAAAAAGCAGAAGCTATGGCTATCAAAGCCAAGTTCGACAAGGATTCAATT
CGTATTCCAGTGCCATCATCAGATAGTGCAGTGCCTAATACAGATAAAACAGAAGAAACT
GAGCATAAGCATCTACCTCGGCCATCTGTTGCTTATGATATAGCAGTCTCAGCAGCATCT
TATGTCCAATCCCGTGCTAAGGACCTATTATCACTTGGCACTGAATCCAATTTGGCAGTT
GATGATGTGACCTTGAAAGGCAATAAAGAGTGTTTCACAGATGAAAAAGATGACTCTTCC
CTAAGAGTATACAAGTCAGAGATGGCTGCATATGTAGCTGCATCAACAATGACAACAATG
GTTGCTGCTGATGAGGAACAAAAACTGGAGGCAGCAAGGGACCTACAATCACTTCAGTCC
TCACCTTGCGAATGGTTTATTTGCGATGACTTAACCACATGTACTCGTTGTTTTGTTATT
CAGGGCTCAGACTCACTGGCATCCTGGCAGGCAAATCTCTTCTTTGAACCCAGCAAATTT
GAGGAAATGGATGTCTTGGTTCATCGAGGAATTTATGAAGCTGCAAAAGGAATATATGAC
CAATTCATGCCGGAGATAATGGAGCATCTGCAGAGGTTTGGAAACAAGGCAAAGTTTCAA
TTTACTGGCCACTCTCTTGGAGGAAGCCTCTCACTTTTGGTCAACTTAATGCTGCTAACC
CGAAAGGTCGTCAAACCATCCTCTCTTCTACCAGTTGTCACTTTTGGATCACCATTTGTG
TTCTGCGGTGGTAAAAAAGTGCTCAATGATTTGGGTTTAGATGAGAATCATGTGCAATGT
GTGATGATGCATAGAGACATTGTTCCGAGGGCATTTTCATGCGTCTACCCAAACCATGTG
GCCCAAGTCCTCAAACGTTTGAATAGTACATTCAGATCCCATCCCTGTCTGAATAAGAAT
AAAATGTTATACTCTCCAATGGGAAAAATATTCATCATCCAGCCTGATGAGAAGTCATCC
GCTCCTCACTCTTTGCTTCCTCCGGGCAGTGGCCTTTATACCCTAGACAACAACCATTGT
GCATTTACTAGGAGAGCTTTCAGAGCCTTTCTGAATTCTCCACACCCATTAGAAATTCTA
AGTGACCCTACAGCATATGGTTCTGGTGGTACAATTCTCAGGGACCATGACTCGAGCAAT
TATCTGAAGGCTGTGAACAGCATTATAAGACAACGGAAGAAGCTCCTTGTCCGGAGAGTA
AGAAAACAGAGGAACATTATTTGGCCGTTATTGGCTTCACAATCTCCACATGCATGGAGC
CATGAGCGCAACATGGAAACTAGAGGAATATTAAGAAAGGAAATAATGTCAGGGGTTTGA

Peptide Sequence

PEP ID

XP_016447168.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107772181 [Nicotiana tabacum]
Sequence

MACSCVSIISSPVTKSSKDAWKDQDNFRSSFSSKGNREKAQMRRSYSDNHLCCRANRIQC
SATQPKLKSSHSTGGPFKLQLSSSFLPDSLRSFLFDIDTNKDINIEDVIFETDPDHDHDN
NGMEVEDETRRSNWIRRLVELRRNWIEKQKKNDTAEMLDMENSGGDCEDEGCEVDYEDDN
DAAGEINIDRESFSRLLRRISWSDSKLFSQLAFLCNMAYVIPEIKPEDLERCYGLVFVTS
SLVKKAEAMAIKAKFDKDSIRIPVPSSDSAVPNTDKTEETEHKHLPRPSVAYDIAVSAAS
YVQSRAKDLLSLGTESNLAVDDVTLKGNKECFTDEKDDSSLRVYKSEMAAYVAASTMTTM
VAADEEQKLEAARDLQSLQSSPCEWFICDDLTTCTRCFVIQGSDSLASWQANLFFEPSKF
EEMDVLVHRGIYEAAKGIYDQFMPEIMEHLQRFGNKAKFQFTGHSLGGSLSLLVNLMLLT
RKVVKPSSLLPVVTFGSPFVFCGGKKVLNDLGLDENHVQCVMMHRDIVPRAFSCVYPNHV
AQVLKRLNSTFRSHPCLNKNKMLYSPMGKIFIIQPDEKSSAPHSLLPPGSGLYTLDNNHC
AFTRRAFRAFLNSPHPLEILSDPTAYGSGGTILRDHDSSNYLKAVNSIIRQRKKLLVRRV
RKQRNIIWPLLASQSPHAWSHERNMETRGILRKEIMSGV

Transcript Sequence

Gene sequence data has not been registered.